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Check in says identical versions despite they have differences

In PowerDesigner, I have a logical data model in a local file done out of a logical data model checked out from our Repository. When I try to check it in after having done some changes, I get in the Output window the message: "The local document and the repository document are identical. The check in has been cancelled." However, when I do a Compare with Repository to my local document, there are changes. Any idea on what can be happening?

Thanks

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