You need post seperate invoices in case where the vendors are different, If the supply vendor and freight provider are same, you can post both costs in once invoice. Select the goods+delivery costs to make one invoice verification.
In general, freight value will not be added even the vendor is same. Inturn both item cost and delivery cost are processed in one invoice.
If you want, you can include the freght in net by maintaining the freight condition as not an accrual.
But, just for this sake, you should not modify your pricing procedure.
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