Simple put one java mapping in the OM before your XSLT mapping.
In Java mapping split
<!DOCTYPE cXML SYSTEM "http://****.org/schemas/cXML/****/cXML.dtd"> portion from inputstream and replace with blank.
If your XSLT mapping is expecting the format only without this then it should work properly.
Anyway, You can handle the same in XSLT mapping as well I guess.
Thanks,
Apu
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