If there is a way I can reverse an good receipt without affecting the GL?

We have differences between balances under Inventory audit report and General Ledger (Balance sheet ) . The difference arises because we have a duplicate good receipt in the Inventory Audit Report by $ 3901.55 . Inventory screens attached audit report and the General Ledger of the " Inventory raw materials " has balances Good receipt corresponding to the dates 04/30/15 and 01/05/15 . I tried to remove the difference between a one entered Journal entry voucher for only $ 3901.55 reversing the transaction in the Inventory Audit Report but it does affect the General Ledger.